Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015825438.1_cds_XP_016502343.1_15995
CDS Infomation

[gene=LOC107820555] [db_xref=GeneID:107820555] [protein=endoglucanase 25-like] [protein_id=XP_016502343.1] [location=complement(join(534..935,1237..1409,1494..1629,1775..2233,2580..2890,3445..3823))] [gbkey=CDS]
Sequence

ATGAGTATGTACGGTAGGGATCCATGGGGAGGACCGTTGGAAATCCACGCCACAGATTCA
GCCACAGACGATGACAGGAGCAGAAACTTGGGGGATTTTGATAGGGCGGCACTGTCGAGA
AATCTGGACGAGACACAGCAAAGCTGGCTGTTGGGTCCAACGGAGCAAAAGAAGAAGAAG
TATGTGGATCTTGGTTGTATTATTGTGAGTCGGAAGATTTTCAAGTGGACTGTGGGCAGT
ATTCTTGCCGCAGCTTTATTAGCTGGATTCATTACTATGATTGTTAAGCTTGCACCTAGA
CACAAACACCACAATCCCCCACCCGATAATTATACCGTCGCTCTCCATAAAGCCCTCATG
TTCTTCAATGCCCAGAAATCTGGAAAATTGCCCAAACACAACAATGTGTCATGGAGGGGA
AATTCATGTTTGAAAGATGGCAAGTCAGATGATTCAACTATGTTCAAAAATTTGGTTGGG
GGATATTATGATGCAGGAGATGCAATCAAGTTTAATTTTCCTCAGTCGTTTGCTCTCACC
ATGTTAAGTTGGAGTGTGATCGAGTATAGTGCAAAATATGAAGCTGCTGGTGAGCTCACT
CATGTTAAAGATATTATTAAGTGGGGTACCGATTATCTCCTGAAGACCTTCAATTCCTCT
GCTGATACCATAGACCGCATTGCTGCGCAGGTTGGAAAAGGGGATACTTCCGGAGGGAGT
ACTGATCCCAATGATCACTATTGTTGGGTGCGTCCAGAAGATATTGATTACGATCGGCCC
GTGACTGAATGTCACGGCTGCTCGGACCTTGCTGCAGAGATGGCTGCTGCTCTGGCTTCT
GCCTCCATTGTTTTTAAGGACAATAAGGCTTATTCACAAAAACTTGCACATGGTGCTAAA
ACACTCTTCAAATTTTCTAGAGACCAGCGTGGTAGATACAGTGTCGGCAATGAAGCTGAA
ACCTTCTACAATTCTACTGGTTACTGGGATGAGTTTATATGGGGTGCAGCTTGGCTGTAC
TATGCTACTGGAAATTCTTCATATCTTCAGCTTGCTACCACTCCTGGTCTCGCCAAACAT
GCTGGTGCTTTTTGGGGAGGCCCTGATTATGGTGTGCTCAGCTGGGATAACAAGCTCACT
GGAGCTCAAGTGCTACTGAGCCGCATGAGACTGTTTTTGAGTCCCGGATATCCTTATGAA
GAAATTTTAAAGACATTTCACAACCAGACGAGCATAATCATGTGCTCCTACTTGCCAATC
TTCACTTCTTTTAACCGCACAAAAGGTGGGTTAATCCAGTTAAACCATGGAAGGCCTCAA
CCTCTTCAGTATGTAGTCAATGCAGCTTTCCTGGCTACCTTGTTTAGTGACTACCTTGAA
GCTGCTGACACTCCTGGATGGTACTGTGGACCCAATTTCTACTCCACTGCTGTCCTGCGT
CGATTCGCTGAGACCCAGATTGACTACATCCTTGGCAAGAATCCCAGGAAAATGAGTTAT
GTTGTTGGCTTTGGCAATCACTACCCTAAGCGCGTTCACCACAGAGGGGCGTCAATTCCT
AAAAACAAGGTCAAGTATAACTGTAAAGGAGGATGGAAATGGAGGGATTCATCTAAGGCT
AATCCGAATATTATTGTTGGAGCCATGGTTGCTGGACCAGACAAGCATGACGGTTTCCAC
GATGTCCGTAGTAATTACAATTATACAGAGCCTACTCTTGCTGGAAACGCTGGTTTAGTT
GCAGCTCTCGTGGCTCTATCTGGAGATAGAGACATCGGAGTTGATAAGAACACGATATTC
TCTGCAGTACCACCGATGTTCCCAACTCCACCTCCTCCACCAGCTCCTTGGAAACCATAA

Peptide Sequence

PEP ID

XP_016502343.1
PEP Infomation

PREDICTED: endoglucanase 25-like [Nicotiana tabacum]
Sequence

MSMYGRDPWGGPLEIHATDSATDDDRSRNLGDFDRAALSRNLDETQQSWLLGPTEQKKKK
YVDLGCIIVSRKIFKWTVGSILAAALLAGFITMIVKLAPRHKHHNPPPDNYTVALHKALM
FFNAQKSGKLPKHNNVSWRGNSCLKDGKSDDSTMFKNLVGGYYDAGDAIKFNFPQSFALT
MLSWSVIEYSAKYEAAGELTHVKDIIKWGTDYLLKTFNSSADTIDRIAAQVGKGDTSGGS
TDPNDHYCWVRPEDIDYDRPVTECHGCSDLAAEMAAALASASIVFKDNKAYSQKLAHGAK
TLFKFSRDQRGRYSVGNEAETFYNSTGYWDEFIWGAAWLYYATGNSSYLQLATTPGLAKH
AGAFWGGPDYGVLSWDNKLTGAQVLLSRMRLFLSPGYPYEEILKTFHNQTSIIMCSYLPI
FTSFNRTKGGLIQLNHGRPQPLQYVVNAAFLATLFSDYLEAADTPGWYCGPNFYSTAVLR
RFAETQIDYILGKNPRKMSYVVGFGNHYPKRVHHRGASIPKNKVKYNCKGGWKWRDSSKA
NPNIIVGAMVAGPDKHDGFHDVRSNYNYTEPTLAGNAGLVAALVALSGDRDIGVDKNTIF
SAVPPMFPTPPPPPAPWKP

Transcript Sequence

Gene sequence data has not been registered.